DDevelopment & Design

mount.ntfs high cpu ubuntu

My computer suffers from sudden and continous hard drive load strokes. Sometimes it lasts for a few minutes and hence work is impossible because everything goes very slow.I’m trying to locate the cause because it makes me nervous :)Today I found one of…

My computer suffers from sudden and continous hard drive load strokes. Sometimes it lasts for a few minutes and hence work is impossible because everything goes very slow.
I’m trying to locate the cause because it makes me nervous :)

Today I found one of the causes. It’s updatedb.mlocate script which is responsible for scanning hard drives and build locate (a location of files) database. But due to some NTFS driver limitations that poor thing thinks that NTFS share is always new and needs to be rescan at every scheduled scan.

How to make sure that you have the same problem? When hard drive starts to choke check all IO processes with

sudo iotop

and look for updatedb.mlocate or mount.ntfs processes with high IO load. If this is the case try to fix it.
The solution is to point NTFS shares as non-scannable. To do this edit

/etc/updatedb.conf

and add your NTFS mount paths to PRUNEPATHS list. Although NTFS is listed in PRUNEFS entry that dummy mlocate script still would scan NTFS shares.

All that I found on Ubuntu forum.

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DDevelopment & Design

CasperJS for Java developers

Why CasperJS

Being a Java developer is kinda hard these days. Java may not be dead yet, but when keeping in sync with all the hipster JavaScript frameworks could make us feel a bit outside the playground. It’s even hard to list JavaScript frameworks with latest releases on one website.

In my current project, we are using AngularJS. It’a a nice abstraction of MV* pattern in frontend layer of any web application (we use Grails underneath). Here is a nice article with an 8-point Win List of Angular way of handling AJAX calls and updating the view. So it’s not only a funny new framework but a truly helper of keeping your code clean and neat.

But there is also another area when you can put helpful JS framework in place of plan-old-java one - functional tests. Especially when you are dealing with one page app with lots of asynchronous REST/JSON communication.

Selenium and Geb

In Java/JVM project the typical is to use Selenium with some wrapper like Geb. So you start your project, setup your CI-functional testing pipeline and… after 1 month of coding your tests stop working and being maintainable. The frameworks itselves are not bad, but the typical setup is so heavy and has so many points of failure that keeping it working in a real life project is really hard.

Here is my list of common myths about Selenium: * It allows you to record test scripts via handy GUI - maybe some static request/response sites. In modern web applications with asynchronous REST/JSON communication your tests must contain a lot of “waitFor” statements and you cannot automate where these should be included. * It allows you to test your web app against many browsers - don’t try to automate IE tests! You have to manually open your app in IE to see how it actually bahaves! * It integrates well with continuous integration servers like Jenkins - you have to setup Selenium Grid on server with X installed to run tests on Chrome or Firefox and a Windows server for IE. And the headless HtmlUnit driver lacks a lot of JS support.

So I decided to try something different and introduce a bit of JavaScript tooling in our project by using CasperJS.

Introduction

CasperJS is simple but powerful navigation scripting & testing utility for PhantomJS - scritable headless WebKit (which is an rendering engine used by Safari and Chrome). In short - CasperJS allows you to navigate and make assertions about web pages as they’d been rendered in Google Chrome. It is enough for me to automate the functional tests of my application.

If you want a gentle introduction to the world of CasperJS I suggest you to read: * Official website, especially installation guide and API * Introductionary article from CasperJS creator Nicolas Perriault * Highlevel testing with CasperJS by Kevin van Zonneveld * grails-angular-scaffolding plugin by Rob Fletcher with some working CasperJS tests

Full example

I run my test suite via following script:

casperjs test --direct --log-level=debug --testhost=localhost:8080 --includes=test/casper/includes/casper-angular.coffee,test/casper/includes/pages.coffee test/casper/specs/

casper-angular.coffe

casper.test.on "fail", (failure) ->
    casper.capture(screenshot)

testhost   = casper.cli.get "testhost"
screenshot = 'test-fail.png'

casper
    .log("Using testhost: #{testhost}", "info")
    .log("Using screenshot: #{screenshot}", "info")

casper.waitUntilVisible = (selector, message, callback) ->
    @waitFor ->
        @visible selector
    , callback, (timeout) ->
        @log("Selector [#{selector}] not visible, failing")
        withParentSelector selector, (parent) ->
            casper.log("Output of parent selector [#{parent}]")
            casper.debugHTML(parent)
        @echo message, "RED_BAR"
        @capture(screenshot)
        @test.fail(f("Wait timeout occured (%dms)", timeout))

withParentSelector = (selector, callback) ->
    if selector.lastIndexOf(" ") > 0
       parent = selector[0..selector.lastIndexOf(" ")-1]
       callback(parent)

Sample pages.coffee:

x = require('casper').selectXPath

class EditDocumentPage

    assertAt: ->
        casper.test.assertSelectorExists("div.customerAccountInfo", 'at EditDocumentPage')

    templatesTreeFirstCategory: 'ul.tree li label'
    templatesTreeFirstTemplate: 'ul.tree li a'
    closePreview: '.closePreview a'
    smallPreview: '.smallPreviewContent img'
    bigPreview: 'img.previewImage'
    confirmDelete: x("//div[@class='modal-footer']/a[1]")

casper.editDocument = new EditDocumentPage()

End a test script:

testhost = casper.cli.get "testhost" or 'localhost:8080'

casper.start "http://#{testhost}/app", ->
    @test.assertHttpStatus 302
    @test.assertUrlMatch /\/fakeLogin/, 'auto login'
    @test.assert @visible('input#Create'), 'mock login button'
    @click 'input#Create'

casper.then ->
    @test.assertUrlMatch /document#\/edit/, 'new document'
    @editDocument.assertAt()
    @waitUntilVisible @editDocument.templatesTreeFirstCategory, 'template categories not visible', ->
        @click @editDocument.templatesTreeFirstCategory
        @waitUntilVisible @editDocument.templatesTreeFirstTemplate, 'template not visible', ->
            @click @editDocument.templatesTreeFirstTemplate

casper.then ->
    @waitUntilVisible @editDocument.smallPreview, 'small preview not visible', ->
        # could be dblclick / whatever
        @mouseEvent('click', @editDocument.smallPreview)

casper.then ->
    @waitUntilVisible @editDocument.bigPreview, 'big preview should be visible', ->
        @test.assertEvalEquals ->
            $('.pageCounter').text()
        , '1/1', 'page counter should be visible'
        @click @editDocument.closePreview

casper.then ->
    @click 'button.cancel'
    @waitUntilVisible '.modal-footer', 'delete confirmation not visible', ->
        @click @editDocument.confirmDelete

casper.run ->
    @test.done()

Here is a list of CasperJS features/caveats used here:

  • Using CoffeeScript is a huge win for your test code to look neat
  • When using casper test command, beware of different (than above articles) logging setup. You can pass --direct --log-level=debug from commandline for best results. Logging is essential here since Phantom often exists without any error and you do want to know what just happened.
  • Extract your helper code into separate files and include them by using --includes switch.
  • When passing server URL as a commandline switch remember that in CoffeeScript variables are not visible between multiple source files (unless getting them via window object)
  • It’s good to override standard waitUntilVisible with capting a screenshot and making a proper log statement. In my version I also look for a parent selector and debugHTML the content of it - great for debugging what is actually rendered by the browser.
  • Selenium and Geb have a nice concept of Page Objects - an abstract models of pages rendered by your application. Using CoffeeScript you can write your own classes, bind selectors to properties and use then in your code script. Assigning the objects to casper instance will end up with quite nice syntax like @editDocument.assertAt().
  • There is some issue with CSS :first and :last selectors. I cannot get them working (but maybe I’m doing something wrong?). But in CasperJS you can also use XPath selectors which are fine for matching n-th child of some element (x("//div[@class='modal-footer']/a[1]")).
    Update: :first and :last are not CSS3 selectors, but JQuery ones. Here is a list of CSS3 selectors, all of these are supported by CasperJS. So you can use nth-child(1) is this case. Thanks Andy and Nicolas for the comments!

Working with CasperJS can lead you to a few hour stall, but after getting things working you have a new, cool tool in your box!

DDevelopment & Design

Enums for scala

Scala has very limited implementation of Enumeration. Enumerated objects can't extends other classes. Partial replacement for it is to use sealed classes. You can do pattern matching on them. When you ommit some possible value you will get compiler wa...
DDevelopment & Design

Zookeeper + Curator = Distributed sync

An application developed for one of my recent projects at TouK involved multiple servers. There was a requirement to ensure failover for the system’s components. Since I had already a few separate components I didn’t want to add more of that, and since there already was a Zookeeper ensemble running - required by one of the services, I’ve decided to go that way with my solution.

What is Zookeeper?

Just a crude distributed synchronization framework. However, it implements Paxos-style algorithms (http://en.wikipedia.org/wiki/Paxos_(computer_science)) to ensure no split-brain scenarios would occur. This is quite an important feature, since I don’t have to care about that kind of problems while using this app. You just need to create an ensemble of a couple of its instances - to ensure high availability. It is basically a virtual filesystem, with files, directories and stuff. One could ask why another filesystem? Well this one is a rather special one, especially for distributed systems. The reason why creating all the locking algorithms on top of Zookeeper is easy is its Ephemeral Nodes - which are just files that exist as long as connection for them exists. After it disconnects - such file disappears.

With such paradigms in place it’s fairly easy to create some high level algorithms for synchronization.

Having that in place, it can safely integrate multiple services ensuring loose coupling in a distributed way.

Zookeeper from developer’s POV

With all the base services for Zookeeper started, it seems there is nothing else, than just connect to it and start implementing necessary algorithms. Unfortunately, the API is quite basic and offers files and directories abstractions with the addition of different node type (file types) - ephemeral and sequence. It is also possible to watch a node for changes.

Using bare Zookeeper is hard!

Creating connections is tedious - and there is lots of things to take care of. Handling an established connection is hard - when establishing connection to ensemble, it’s necessary to negotiate a session also. During the whole process a number of exceptions can occur - these are “recoverable” exceptions, that can be gracefully handled and not break the connection.

    class="c8"><span>So, Zookeeper API is hard.</span></p><p class="c1"><span></span></p><p class="c8"><span>Even if one is proficient with that API, then there come recipes. The reason for using Zookeeper is to be able to implement some more sophisticated algorithms on top of it. Unfortunately those aren&rsquo;t trivial and it is again quite hard to implement them without bugs.</span>

And since distributed systems are hard, why would anyone want another difficult to handle tool?

Enter Curator

<p 
    class="c8"><span>Happily, guys from Netflix implemented a nice abstraction for dealing with Zookeeper internals. They called it Curator and use it extensively in the company&rsquo;s environment. Curator offers consistent API for Zookeeper&rsquo;s functionality. It even implements a couple of recipes for distributed systems.</span>

File read/write

<p 
    class="c8"><span>The basic use of Zookeeper is as a distributed configuration repository. For this scenario I only need read/write capabilities, to be able to write and read files from the Zookeeper filesystem. This code snippet writes a sample json to a file on ZK filesystem.</span>

<a href="#" 
                                                                                                  name="0"></a>


EnsurePath ensurePath = new EnsurePath(markerPath);
ensurePath.ensure(client.getZookeeperClient());
String json = “...”;
if (client.checkExists().forPath(statusFile(core)) != null)
     client.setData().forPath(statusFile(core), json.getBytes());
else
     client.create().forPath(statusFile(core), json.getBytes());

Distributed locking

Having multiple systems there may be a need of using an exclusive lock for some resource, or perhaps some big system requires it’s components to synchronize based on locks. This “recipe” is an ideal match for those situations.

ref="#"
                                                                                    name="b0329bbbf14b79ffaba1139881914aea887ef6a3"></a>




lock = new InterProcessSemaphoreMutex(client, lockPath);
lock.acquire(5, TimeUnit.MINUTES);
… do sth …
lock.release();

 (from https://github.com/zygm0nt/curator-playground/blob/master/src/main/java/pl/touk/curator/LockingRemotely.java)

Sevice Advertisement

<p

    class="c8"><span>This is quite an interesting use case. With many small services on different servers it is not wise to exchange ip addresses and ports between them. When some of those services may go down, while other will try to replace them - the task gets even harder. </span>

That’s why, with Zookeeper in place, it can be utilised as a registry of existing services.

If a service starts, it registers into the ServiceRegistry, offering basic information, like it’s purpose, role, address, and port.

Services that want to use a specific kind of service request an access to some instance. This way of configuring easily decouples services from their configuration.

Basically this scenario needs ? steps:

<span>1. Service starts and registers its presence (</span><span class="c5"><a class="c0"
                                                                               href="https://github.com/zygm0nt/curator-playground/blob/master/src/main/java/pl/touk/curator/WorkerAdvertiser.java#L44">https://github.com/zygm0nt/curator-playground/blob/master/src/main/java/pl/touk/curator/WorkerAdvertiser.java#L44</a></span><span>)</span><span>:</span>




ServiceDiscovery discovery = getDiscovery();
            discovery.start();
            ServiceInstance si = getInstance();
            log.info(si);
            discovery.registerService(si);

2. Another service - on another host or in another JVM on the same machine tries to discover who is implementing the service (https://github.com/zygm0nt/curator-playground/blob/master/src/main/java/pl/touk/curator/WorkerFinder.java#L50):

<a href="#"

                                                                                                  name="3"></a>


instances = discovery.queryForInstances(serviceName);

The whole concept here is ridiculously simple - the service advertising its presence just stores a file with its whereabouts. The service that is looking for service providers just look into specific directory and read stored definitions.

In my example, the structure advertised by services looks like this (+ some getters and constructor - the rest is here: https://github.com/zygm0nt/curator-playground/blob/master/src/main/java/pl/touk/model/WorkerMetadata.java): 



public final class WorkerMetadata {
    private final UUID workerId;
    private final String listenAddress;
    private final int listenPort;
}

Source code

<p

    class="c8"><span>The above recipes are available in Curator library (</span><span class="c5"><a class="c0"
                                                                                                    href="http://curator.incubator.apache.org/">http://curator.incubator.apache.org/</a></span><span>). Recipes&rsquo;
usage examples are in my github repo at </span><span class="c5"><a class="c0"
                                                                   href="https://github.com/zygm0nt/curator-playground">https://github.com/zygm0nt/curator-playground</a></span>

Conclusion

<p 
    class="c8"><span>If you&rsquo;re in need of a reliable platform for exchanging data and managing synchronization, and you need to do it in a distributed fashion - just choose Zookeeper. Then add Curator for the ease of using it. Enjoy!</span>

  1. image comes from: http://www.flickr.com/photos/jfgallery/2993361148
  2. all source code fragments taken from this repo: https://github.com/zygm0nt/curator-playground

An application developed for one of my recent projects at TouK involved multiple servers. There was a requirement to ensure failover for the system’s components. Since I had already a few separate components I didn’t want to add more of that, and since there already was a Zookeeper ensemble running - required by one of the services, I’ve decided to go that way with my solution.

What is Zookeeper?

Just a crude distributed synchronization framework. However, it implements Paxos-style algorithms (http://en.wikipedia.org/wiki/Paxos_(computer_science)) to ensure no split-brain scenarios would occur. This is quite an important feature, since I don’t have to care about that kind of problems while using this app. You just need to create an ensemble of a couple of its instances - to ensure high availability. It is basically a virtual filesystem, with files, directories and stuff. One could ask why another filesystem? Well this one is a rather special one, especially for distributed systems. The reason why creating all the locking algorithms on top of Zookeeper is easy is its Ephemeral Nodes - which are just files that exist as long as connection for them exists. After it disconnects - such file disappears.

With such paradigms in place it’s fairly easy to create some high level algorithms for synchronization.

Having that in place, it can safely integrate multiple services ensuring loose coupling in a distributed way.

Zookeeper from developer’s POV

With all the base services for Zookeeper started, it seems there is nothing else, than just connect to it and start implementing necessary algorithms. Unfortunately, the API is quite basic and offers files and directories abstractions with the addition of different node type (file types) - ephemeral and sequence. It is also possible to watch a node for changes.

Using bare Zookeeper is hard!

Creating connections is tedious - and there is lots of things to take care of. Handling an established connection is hard - when establishing connection to ensemble, it’s necessary to negotiate a session also. During the whole process a number of exceptions can occur - these are “recoverable” exceptions, that can be gracefully handled and not break the connection.

    class="c8"><span>So, Zookeeper API is hard.</span></p><p class="c1"><span></span></p><p class="c8"><span>Even if one is proficient with that API, then there come recipes. The reason for using Zookeeper is to be able to implement some more sophisticated algorithms on top of it. Unfortunately those aren&rsquo;t trivial and it is again quite hard to implement them without bugs.</span>

And since distributed systems are hard, why would anyone want another difficult to handle tool?

Enter Curator

<p 
    class="c8"><span>Happily, guys from Netflix implemented a nice abstraction for dealing with Zookeeper internals. They called it Curator and use it extensively in the company&rsquo;s environment. Curator offers consistent API for Zookeeper&rsquo;s functionality. It even implements a couple of recipes for distributed systems.</span>

File read/write

<p 
    class="c8"><span>The basic use of Zookeeper is as a distributed configuration repository. For this scenario I only need read/write capabilities, to be able to write and read files from the Zookeeper filesystem. This code snippet writes a sample json to a file on ZK filesystem.</span>

<a href="#" 
                                                                                                  name="0"></a>


EnsurePath ensurePath = new EnsurePath(markerPath);
ensurePath.ensure(client.getZookeeperClient());
String json = “...”;
if (client.checkExists().forPath(statusFile(core)) != null)
     client.setData().forPath(statusFile(core), json.getBytes());
else
     client.create().forPath(statusFile(core), json.getBytes());

Distributed locking

Having multiple systems there may be a need of using an exclusive lock for some resource, or perhaps some big system requires it’s components to synchronize based on locks. This “recipe” is an ideal match for those situations.

ref="#"
                                                                                    name="b0329bbbf14b79ffaba1139881914aea887ef6a3"></a>




lock = new InterProcessSemaphoreMutex(client, lockPath);
lock.acquire(5, TimeUnit.MINUTES);
… do sth …
lock.release();

 (from https://github.com/zygm0nt/curator-playground/blob/master/src/main/java/pl/touk/curator/LockingRemotely.java)

Sevice Advertisement

<p

    class="c8"><span>This is quite an interesting use case. With many small services on different servers it is not wise to exchange ip addresses and ports between them. When some of those services may go down, while other will try to replace them - the task gets even harder. </span>

That’s why, with Zookeeper in place, it can be utilised as a registry of existing services.

If a service starts, it registers into the ServiceRegistry, offering basic information, like it’s purpose, role, address, and port.

Services that want to use a specific kind of service request an access to some instance. This way of configuring easily decouples services from their configuration.

Basically this scenario needs ? steps:

<span>1. Service starts and registers its presence (</span><span class="c5"><a class="c0"
                                                                               href="https://github.com/zygm0nt/curator-playground/blob/master/src/main/java/pl/touk/curator/WorkerAdvertiser.java#L44">https://github.com/zygm0nt/curator-playground/blob/master/src/main/java/pl/touk/curator/WorkerAdvertiser.java#L44</a></span><span>)</span><span>:</span>




ServiceDiscovery discovery = getDiscovery();
            discovery.start();
            ServiceInstance si = getInstance();
            log.info(si);
            discovery.registerService(si);

2. Another service - on another host or in another JVM on the same machine tries to discover who is implementing the service (https://github.com/zygm0nt/curator-playground/blob/master/src/main/java/pl/touk/curator/WorkerFinder.java#L50):

<a href="#"

                                                                                                  name="3"></a>


instances = discovery.queryForInstances(serviceName);

The whole concept here is ridiculously simple - the service advertising its presence just stores a file with its whereabouts. The service that is looking for service providers just look into specific directory and read stored definitions.

In my example, the structure advertised by services looks like this (+ some getters and constructor - the rest is here: https://github.com/zygm0nt/curator-playground/blob/master/src/main/java/pl/touk/model/WorkerMetadata.java): 



public final class WorkerMetadata {
    private final UUID workerId;
    private final String listenAddress;
    private final int listenPort;
}

Source code

<p

    class="c8"><span>The above recipes are available in Curator library (</span><span class="c5"><a class="c0"
                                                                                                    href="http://curator.incubator.apache.org/">http://curator.incubator.apache.org/</a></span><span>). Recipes&rsquo;
usage examples are in my github repo at </span><span class="c5"><a class="c0"
                                                                   href="https://github.com/zygm0nt/curator-playground">https://github.com/zygm0nt/curator-playground</a></span>

Conclusion

<p 
    class="c8"><span>If you&rsquo;re in need of a reliable platform for exchanging data and managing synchronization, and you need to do it in a distributed fashion - just choose Zookeeper. Then add Curator for the ease of using it. Enjoy!</span>

  1. image comes from: http://www.flickr.com/photos/jfgallery/2993361148
  2. all source code fragments taken from this repo: https://github.com/zygm0nt/curator-playground